chr14 : 29,925,416 – 29,925,666
250 bp 36 TFs 2 linked genes
This 250 bp open chromatin element is linked to PRKD1 and ENSG00000287142 and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PRKD1 2.2 kb Proximal Proximity
ENSG00000287142 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:29,920,416 – 29,930,666
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 2 datasets
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 122 bp overlap
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 83 bp overlap
ARID1A 3 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 250 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 69 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 111 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 250 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 218 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 250 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 54 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 205 bp overlap
CHD1 2 datasets
ChIP LNCaP GSE64528.CHD1.LNCaP 250 bp overlap
ChIP LNCaP_DHT GSE64528.CHD1.LNCaP_DHT 132 bp overlap
COBLL1 1 dataset
ChIP LTAD_EtOH GSE94577.COBLL1.LTAD_EtOH 139 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 208 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 197 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 55 bp overlap
FOXK2 1 dataset
ChIP GM12878 ENCSR861JUQ.FOXK2.GM12878 161 bp overlap
HDAC1 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 135 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 242 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 101 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 138 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 208 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 250 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 77 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 61 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 250 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 59 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 144 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 201 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 232 bp overlap
NANOG 3 datasets
ChIP H1 ENCFF747ZPQ 199 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 221 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 149 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 94 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCFF644MZN 86 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 222 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 112 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 201 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 250 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 165 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 148 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 66 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 134 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 250 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 133 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 250 bp overlap
TEAD4 5 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 250 bp overlap
ChIP H1 ENCFF778PAX 170 bp overlap
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 77 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 220 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 144 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 189 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 146 bp overlap
ZNF800 1 dataset
ChIP HepG2 ENCFF840FYM 207 bp overlap