Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

AR 3 datasets

ChIP 22Rv1 GSE85558.AR.22Rv1 136 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap

ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 119 bp overlap

CHD2 2 datasets

ChIP K-562 ENCSR000EHD.CHD2.K-562 142 bp overlap

ChIP K562 ENCFF857WME 337 bp overlap

CTCF 8 datasets

ChIP 22Rv1 ENCFF466OXN 500 bp overlap

ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 409 bp overlap

ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 430 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 217 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 278 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 339 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 205 bp overlap

ChIP MCF-7 ENCFF414SZG 191 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 95 bp overlap

FOXA1 48 datasets

ChIP 22Rv1 GSE96652.FOXA1.22Rv1 327 bp overlap

ChIP 22Rv1 GSE85558.FOXA1.22Rv1 304 bp overlap

ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 454 bp overlap

ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 302 bp overlap

ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 265 bp overlap

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 253 bp overlap

ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 299 bp overlap

ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 310 bp overlap

ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 323 bp overlap

ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 283 bp overlap

ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 288 bp overlap

ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 382 bp overlap

ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 210 bp overlap

ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 301 bp overlap

ChIP A-549 ENCSR000BPX.FOXA1.A-549 212 bp overlap

ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 227 bp overlap

ChIP MCF-7 ENCFF465LTH 320 bp overlap

ChIP MCF-7 ERP001226.FOXA1.MCF-7 251 bp overlap

ChIP MCF-7 GSE72249.FOXA1.MCF-7 280 bp overlap

ChIP MCF-7 ERP000380.FOXA1.MCF-7 187 bp overlap

ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 194 bp overlap

ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 155 bp overlap

ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 132 bp overlap

ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 151 bp overlap

ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 271 bp overlap

ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 316 bp overlap

ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 244 bp overlap

ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 191 bp overlap

ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 307 bp overlap

ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 183 bp overlap

ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 333 bp overlap

ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 243 bp overlap

ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 349 bp overlap

ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 383 bp overlap

ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 301 bp overlap

ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 361 bp overlap

ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 149 bp overlap

ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 301 bp overlap

ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 228 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 201 bp overlap

ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 384 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 271 bp overlap

ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 194 bp overlap

ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 150 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 353 bp overlap

ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 249 bp overlap

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 344 bp overlap

ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 75 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 500 bp overlap

ChIP DE DE-FOXA2-2 500 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 137 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 376 bp overlap

ChIP DE DE-GATA4-2 459 bp overlap

ChIP foregut GSE117136.GATA4.foregut 305 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 379 bp overlap

ChIP DE DE-GATA6-2 366 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 334 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 265 bp overlap

ChIP foregut GSE117136.GATA6.foregut 303 bp overlap

HOXB13 1 dataset

ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 101 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 180 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 224 bp overlap

POU2F1 3 datasets

ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 296 bp overlap

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 303 bp overlap

ChIP T-47D GSE148277.POU2F1.T-47D 197 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 195 bp overlap

ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 121 bp overlap

ChIP MCF-7 GSE72082.RAD21.MCF-7 170 bp overlap

ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 157 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 261 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 464 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 408 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 452 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 332 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 204 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 500 bp overlap

SUZ12 1 dataset

ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap

ZNF287 1 dataset

ChIP HEK293T GSE78099.ZNF287.HEK293T 83 bp overlap

ZNF485 1 dataset

ChIP HEK293T GSE78099.ZNF485.HEK293T 61 bp overlap

ZNF680 3 datasets

ChIP HEK293 ENCFF418WHE 277 bp overlap

ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 336 bp overlap

ChIP HEK293 GSE76494.ZNF680.HEK293 269 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
PELI2		186.3 kb	Distal	Multiome
KTN1		351.9 kb	Distal	Multiome

Genome Browser