Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 173 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 124 bp overlap

BRD4 2 datasets

ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 190 bp overlap

BRD9 1 dataset

ChIP G-401 GSE120234.BRD9.G-401 439 bp overlap

CBX2 1 dataset

ChIP K-562 ENCSR000ATU.CBX2.K-562 304 bp overlap

CBX8 1 dataset

ChIP K-562 ENCSR000ATW.CBX8.K-562 439 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 188 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 301 bp overlap

CRY1 1 dataset

ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 236 bp overlap

EGR1 1 dataset

ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 187 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 308 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 296 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 439 bp overlap

ChIP DE DE-FOXA2-2 439 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 439 bp overlap

ChIP DE DE-GATA4-2 439 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 341 bp overlap

ChIP DE DE-GATA6-2 439 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 439 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 439 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 439 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 439 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 439 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 439 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 337 bp overlap

HOXB13 1 dataset

ChIP G-401 GSE65381.HOXB13.G-401 439 bp overlap

JUN 5 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 439 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 439 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 439 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 439 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 439 bp overlap

MAZ 2 datasets

ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 209 bp overlap

ChIP HEK293 GSE76494.MAZ.HEK293 169 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 167 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 414 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 439 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 275 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 439 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 439 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 162 bp overlap

PAX5 1 dataset

ChIP fetal_testis GSE100639.PAX5.fetal_testis 78 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 407 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 294 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 228 bp overlap

RNF2 3 datasets

ChIP K-562 ENCSR820GND.RNF2.K-562 112 bp overlap

ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 73 bp overlap

ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 159 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 213 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 228 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 155 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 206 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 439 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 439 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 439 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 439 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 439 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 439 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 439 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 439 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 175 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 232 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 385 bp overlap

SMARCA4 2 datasets

ChIP K-562 ENCSR643VTW.SMARCA4.K-562 311 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 397 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 347 bp overlap

SMARCC1 5 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 277 bp overlap

ChIP DE_D1 S10-DE-d1-BAF155-exp1 292 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 412 bp overlap

ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 233 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 354 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 386 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 439 bp overlap

SP7 1 dataset

ChIP HEK293 ENCSR468IJT.SP7.HEK293 326 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 378 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 338 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 263 bp overlap

ZNF273 1 dataset

ChIP HEK293T GSE78099.ZNF273.HEK293T 183 bp overlap

ZNF317 1 dataset

ChIP HEK293 GSE76494.ZNF317.HEK293 178 bp overlap

ZNF335 2 datasets

ChIP HEK293 ENCFF784SLD 420 bp overlap

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 439 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
LINC03059		at TSS	At TSS	Proximity
ENSG00000286257		7.8 kb	Proximal	Proximity

Genome Browser