chr14 : 59,476,478 – 59,476,883
405 bp 23 TFs 2 linked genes
This 405 bp open chromatin element is linked to L3HYPDH and JKAMP and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
L3HYPDH 7.5 kb Proximal Proximity
JKAMP 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:59,471,478 – 59,481,883
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP DU145_FOXA1 GSE47987.AR.DU145_FOXA1 101 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 119 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 327 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 366 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 378 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 345 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 305 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 315 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 237 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 294 bp overlap
ChIP DE DE-FOXA2-1 405 bp overlap
ChIP DE DE-FOXA2-2 387 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 405 bp overlap
ChIP DE DE-GATA4-2 405 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 405 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 326 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 286 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 300 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 313 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 358 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 307 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 194 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 191 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 284 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 311 bp overlap
RAD21 1 dataset
ChIP MCF-7 GSE72082.RAD21.MCF-7 124 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 232 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 371 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 209 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 402 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 189 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 211 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 283 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 111 bp overlap
TAF1 1 dataset
ChIP A-549 ENCSR000BPF.TAF1.A-549 205 bp overlap