chr14 : 89,960,989 – 89,961,253
264 bp 20 TFs 3 linked genes
This 264 bp open chromatin element is linked to TDP1, EFCAB11, and ENSG00000259053 and is bound by 20 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TDP1 5.1 kb Proximal Proximity
EFCAB11 6.3 kb Proximal Proximity
ENSG00000259053 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:89,955,989 – 89,966,253
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 55 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 264 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 264 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 63 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 61 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 166 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 148 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF045HUU 264 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 264 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 186 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 264 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 126 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 87 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 159 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 259 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 264 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 263 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 55 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 167 bp overlap