chr15 : 29,162,166 – 29,163,015
849 bp 45 TFs 2 linked genes
This 849 bp open chromatin element is linked to NSMCE3 and APBA2 and is bound by 45 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NSMCE3 107.2 kb Distal Multiome
APBA2 276.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:29,157,166 – 29,168,015
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 375 bp overlap
ChIP DE DE-FOXA2-2 486 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 511 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 329 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 460 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 643 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 659 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 281 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 288 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_72h DE_72h-KLF11_MA1512.2 10 bp overlap
KLF14 1 dataset
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_72h DE_72h-KLF9_MA1107.3 11 bp overlap
Motif DE_72h DE_72h-KLF9_MA1107.3 11 bp overlap
MGA 1 dataset
Motif DE_72h DE_72h-MGA_MA0801.1 8 bp overlap
NR2C1 1 dataset
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR5A1 1 dataset
Motif DE_72h DE_72h-NR5A1_MA1540.3 12 bp overlap
Nr1H2 1 dataset
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
PATZ1 1 dataset
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 647 bp overlap
Plagl1 1 dataset
Motif DE_72h DE_72h-Plagl1_MA1615.2 8 bp overlap
RBPJ 1 dataset
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 335 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 304 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 545 bp overlap
SP3 1 dataset
Motif DE_72h DE_72h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_72h DE_72h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_72h DE_72h-SP9_MA1564.2 10 bp overlap
TBX1 1 dataset
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_72h DE_72h-TBX20_MA0689.1 11 bp overlap
TBX5 1 dataset
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 235 bp overlap
Tbx6 1 dataset
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
Wt1 2 datasets
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 172 bp overlap
ChIP K562 ENCFF255RZG 123 bp overlap
ZNF148 2 datasets
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF740 1 dataset
Motif DE_72h DE_72h-ZNF740_MA0753.3 10 bp overlap