chr15 : 50,900,796 – 50,901,063
267 bp 22 TFs 2 linked genes
This 267 bp open chromatin element is linked to ENSG00000273674 and AP4E1 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000273674 7.5 kb Proximal Proximity
AP4E1 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:50,895,796 – 50,906,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 222 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 267 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 267 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 164 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 247 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 175 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 185 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 267 bp overlap
ChIP DE DE-FOXA2-1 267 bp overlap
ChIP DE DE-FOXA2-2 267 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 180 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 177 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 267 bp overlap
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 144 bp overlap
GATA3 6 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 189 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 186 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 255 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 245 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 257 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 133 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 236 bp overlap
ChIP DE DE-GATA4-1 267 bp overlap
ChIP DE DE-GATA4-2 267 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 267 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 267 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 267 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 249 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 216 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 267 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 267 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 195 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 179 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 163 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 206 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 267 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 267 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 205 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 218 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 156 bp overlap
ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 98 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 247 bp overlap