chr15 : 55,581,323 – 55,581,979
656 bp 16 TFs 2 linked genes
This 656 bp open chromatin element is linked to PYGO1 and ENSG00000285805 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PYGO1 6.4 kb Proximal Proximity
ENSG00000285805 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:55,576,323 – 55,586,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 168 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 216 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 354 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 325 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 262 bp overlap
ChIP DE DE-FOXA2-1 618 bp overlap
ChIP DE DE-FOXA2-2 630 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 373 bp overlap
ChIP DE DE-GATA4-1 578 bp overlap
ChIP DE DE-GATA4-2 656 bp overlap
ChIP foregut GSE117136.GATA4.foregut 493 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 656 bp overlap
GATA6 11 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 210 bp overlap
ChIP DE DE-GATA6-1 483 bp overlap
ChIP DE DE-GATA6-2 602 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 89 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 630 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 471 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 130 bp overlap
ChIP foregut GSE117136.GATA6.foregut 464 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 388 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 345 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 393 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 365 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 99 bp overlap
RORB 1 dataset
ChIP WTC11 ENCFF444ARW 237 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 487 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 321 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 437 bp overlap
SPI1 10 datasets
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 117 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 110 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 52 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 91 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 110 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 56 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 151 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 112 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 59 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 125 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 74 bp overlap
ZNF18 1 dataset
ChIP HEK293 GSE76494.ZNF18.HEK293 80 bp overlap