chr15 : 67,152,836 – 67,153,778
942 bp 90 TFs 3 linked genes
This 942 bp open chromatin element is linked to SMAD3, AAGAB, and IQCH and is bound by 90 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SMAD3 87.7 kb Distal Multiome
AAGAB 101.4 kb Distal Multiome
IQCH 101.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:67,147,836 – 67,158,778
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 325 bp overlap
ARID1A 3 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 227 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 270 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 309 bp overlap
ASCL1 2 datasets
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 286 bp overlap
ATF2 1 dataset
Motif DE_72h DE_72h-ATF2_MA1632.2 10 bp overlap
Arid5a 1 dataset
Motif DE_72h DE_72h-Arid5a_MA0602.2 8 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 330 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 190 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 247 bp overlap
CEBPA 1 dataset
Motif DE_72h DE_72h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_72h DE_72h-CEBPD_MA0836.3 8 bp overlap
CREB1 1 dataset
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF364PUR 380 bp overlap
ChIP BLaER1 ENCFF460KDD 235 bp overlap
ChIP BLaER1 ENCFF508JZF 441 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
EP300 1 dataset
ChIP 697 GSE138031.EP300.697 215 bp overlap
FEZF2 2 datasets
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 3 datasets
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 942 bp overlap
ChIP DE DE-FOXA2-2 942 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 529 bp overlap
ChIP DE DE-GATA4-1 258 bp overlap
ChIP DE DE-GATA4-2 942 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 247 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 425 bp overlap
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 541 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 436 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
IKZF1 2 datasets
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 169 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 248 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 267 bp overlap
JUN 4 datasets
ChIP A549 ENCFF846DUV 256 bp overlap
ChIP A549 ENCFF846DUV 595 bp overlap
ChIP A549 ENCFF846DUV 685 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 386 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 282 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 249 bp overlap
MED1 4 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 127 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 292 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 73 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 164 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap
NCAPH2 3 datasets
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 296 bp overlap
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 206 bp overlap
ChIP RMG-I GSE120058.NCAPH2.RMG-I 162 bp overlap
NFKB1 1 dataset
Motif DE_72h DE_72h-NFKB1_MA0105.4 13 bp overlap
NR2C1 1 dataset
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 447 bp overlap
Nr1H2 1 dataset
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
OSR1 1 dataset
Motif DE_72h DE_72h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_72h DE_72h-OSR2_MA1646.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 221 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 340 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 722 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 345 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 4 datasets
ChIP 697 GSE138031.RUNX1.697 238 bp overlap
ChIP 697 GSE138031.RUNX1.697 275 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 125 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 173 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 235 bp overlap
Rarg 1 dataset
Motif DE_72h DE_72h-Rarg_MA0860.1 17 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 517 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 289 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 320 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 254 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 240 bp overlap
SNAI1 1 dataset
Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 305 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 703 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 418 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0828.3 10 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 348 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
TCF12 1 dataset
Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
THRA 1 dataset
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
ZEB1 3 datasets
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF135 1 dataset
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF213 1 dataset
Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap
ZNF281 1 dataset
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_72h DE_72h-ZNF320_MA1976.2 20 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 453 bp overlap
ZNF770 1 dataset
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap