chr15 : 76,253,843 – 76,254,335
492 bp 59 TFs 3 linked genes
This 492 bp open chromatin element is linked to ETFA, TMEM266, and NRG4 and is bound by 59 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ETFA 57.4 kb Distal Multiome
TMEM266 194.1 kb Distal Multiome
NRG4 194.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:76,248,843 – 76,259,335
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 127 bp overlap
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 147 bp overlap
AR 1 dataset
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 74 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 422 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 158 bp overlap
BRD4 6 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 492 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 155 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 289 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 382 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 203 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 123 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 140 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 137 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 246 bp overlap
EGR1 1 dataset
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 96 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 257 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 253 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 138 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 217 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 314 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 281 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 492 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 316 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 325 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 391 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 435 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 423 bp overlap
ChIP DE DE-FOXA2-2 309 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 454 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 197 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 442 bp overlap
ChIP DE DE-GATA6-2 492 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 377 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 368 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 394 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 418 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 405 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 458 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 344 bp overlap
ChIP foregut GSE117136.GATA6.foregut 254 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 152 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 313 bp overlap
ChIP SK-N-SH ENCFF285GEQ 218 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 287 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 112 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 453 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 270 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 181 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 388 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 195 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 361 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 358 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 282 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 263 bp overlap
NR3C1 1 dataset
ChIP LCL_DEX GSE45638.NR3C1.LCL_DEX 94 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 176 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 60 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 158 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 325 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 299 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 379 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 211 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 419 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 328 bp overlap
SETDB1 3 datasets
ChIP HEK293 ENCFF676PLV 157 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 116 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 116 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 434 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 387 bp overlap
SMARCA4 3 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 223 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 140 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 259 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 262 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 334 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 492 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 264 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 243 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 305 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 51 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 253 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 205 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 312 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 492 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 492 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 245 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 170 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 189 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 285 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap