Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 599 bp overlap

BRD4 5 datasets

ChIP COLO-741 GSE73319.BRD4.COLO-741 120 bp overlap

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 480 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 425 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 192 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 174 bp overlap

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 410 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 258 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 480 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 519 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 415 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 544 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 584 bp overlap

EGR1 1 dataset

ChIP WA01 ENCSR000BJA.EGR1.WA01 162 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 299 bp overlap

ESR1 2 datasets

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 276 bp overlap

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 125 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 235 bp overlap

FLI1 5 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 371 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 419 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 214 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 253 bp overlap

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 358 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 479 bp overlap

ChIP DE DE-FOXA2-2 379 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 229 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 344 bp overlap

ChIP DE DE-GATA4-2 535 bp overlap

ChIP foregut GSE117136.GATA4.foregut 507 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 532 bp overlap

ChIP DE DE-GATA6-2 599 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 362 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 420 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 491 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 488 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 571 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 491 bp overlap

ChIP foregut GSE117136.GATA6.foregut 412 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 299 bp overlap

HDAC2 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 236 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 216 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 374 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 295 bp overlap

MAX 2 datasets

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 109 bp overlap

ChIP melanocyte GSE115845.MAX.melanocyte 186 bp overlap

MED1 1 dataset

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 377 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 347 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 555 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 401 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 399 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 405 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 236 bp overlap

NANOG 1 dataset

ChIP WA01 ENCSR000BMT.NANOG.WA01 168 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 378 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 262 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 305 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 333 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 416 bp overlap

OTX2 2 datasets

ChIP WTC11 ENCFF634NAO 245 bp overlap

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 457 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 435 bp overlap

PKNOX1 3 datasets

ChIP HEK293T ENCFF174WDB 391 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 202 bp overlap

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 294 bp overlap

RARA 1 dataset

ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 379 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 540 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 130 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 472 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 504 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 535 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 392 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 506 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 424 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 460 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 178 bp overlap

SMARCC1 2 datasets

ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 218 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 192 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 230 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 514 bp overlap

STAT3 1 dataset

ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 210 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 200 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 416 bp overlap

ZBTB17 1 dataset

ChIP HEK293 ENCFF865LIO 477 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 462 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 497 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 417 bp overlap

Gene	Dist. to TSS	Distance	Link type
ENSG00000259362	at TSS	At TSS	Proximity
HMG20A	104.6 kb	Distal	Multiome
PEAK1	105.4 kb	Distal	Multiome
TSPAN3	454.4 kb	Distal	Multiome+HiCAR

Genome Browser