chr15 : 77,528,312 – 77,529,264
952 bp 100 TFs 4 linked genes
This 952 bp open chromatin element is linked to 4 target genes and is bound by 100 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000259362 2.8 kb Proximal Proximity
HMG20A 108.0 kb Distal Multiome
PEAK1 108.7 kb Distal Multiome
TSPAN3 457.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:77,523,312 – 77,534,264
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 172 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 181 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 148 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 242 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 312 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 282 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 232 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 242 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 59 bp overlap
CREBBP_M768 1 dataset
ChIP NCI-H3396_E2 GSE32349.CREBBP_M768.NCI-H3396_E2 120 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 257 bp overlap
CTCF 6 datasets
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 141 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 235 bp overlap
ChIP chondrocyte ENCFF134ORZ 419 bp overlap
ChIP endodermal cell ENCFF471YCZ 401 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 307 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 352 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 286 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 175 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 150 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 279 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 522 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 391 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 462 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 515 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 317 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 376 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 642 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 214 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 225 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 216 bp overlap
ETV4 1 dataset
ChIP HepG2 ENCFF534CDD 413 bp overlap
FIP1L1 1 dataset
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 191 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 666 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 611 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 722 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 293 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 837 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 731 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 270 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 383 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 183 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 120 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 158 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 133 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 185 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 127 bp overlap
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 123 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 444 bp overlap
ChIP K562 ENCFF348IBL 260 bp overlap
ChIP K562 ENCFF771OHZ 497 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 445 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 520 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 168 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 135 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 208 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 193 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 210 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 195 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 568 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 92 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 229 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 157 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 192 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 391 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 94 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 156 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 192 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 307 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 153 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 245 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 217 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 232 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 188 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 725 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 269 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 268 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 784 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 201 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 672 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 149 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 152 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF970YZO 376 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 214 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 121 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 359 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 622 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 270 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 591 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 863 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 234 bp overlap
ChIP NCCIT GSE71675.PRDM14.NCCIT 239 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 378 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 201 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 227 bp overlap
RBM39 1 dataset
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 158 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 323 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 389 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 163 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 208 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 263 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 176 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 749 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 744 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 559 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 687 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 669 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 545 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 400 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 283 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 242 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 417 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 470 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 139 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 160 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 129 bp overlap
SREBF2 1 dataset
ChIP HeLa-S3 ENCSR611WZO.SREBF2.HeLa-S3 283 bp overlap
SRSF1 1 dataset
ChIP HepG2 ENCFF509LHO 135 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 177 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 691 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 56 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 185 bp overlap
TARDBP 2 datasets
ChIP K-562 ENCSR429XTR.TARDBP.K-562 174 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 167 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 502 bp overlap
ChIP HepG2 ENCFF811TLA 181 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 151 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 177 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 187 bp overlap
TP53 10 datasets
ChIP GM00011 GSE55727.TP53.GM00011 262 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 445 bp overlap
ChIP H9 GSE142050.TP53.H9 659 bp overlap
ChIP H9_IFI16 GSE142050.TP53.H9_IFI16 258 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 598 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 449 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 298 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 215 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 228 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 330 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 142 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 188 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 240 bp overlap
ZBTB24 1 dataset
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 196 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 253 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 248 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 431 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 720 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 166 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 107 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 133 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 169 bp overlap
ZNF276 1 dataset
ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 237 bp overlap
ZNF30 2 datasets
ChIP HepG2 ENCFF688UNH 96 bp overlap
ChIP HepG2 ENCFF688UNH 347 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 521 bp overlap
ChIP HEK293 ENCFF944VMC 433 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 402 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 357 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 82 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 146 bp overlap
ZNF883 2 datasets
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 216 bp overlap
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 215 bp overlap
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