chr15 : 88,477,228 – 88,477,754
526 bp 24 TFs 2 linked genes
This 526 bp open chromatin element is linked to MRPS11 and MRPL46 and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MRPS11 9.5 kb Proximal Proximity
MRPL46 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:88,472,228 – 88,482,754
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 2 datasets
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 132 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 148 bp overlap
BRD4 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 141 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 297 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 309 bp overlap
CTCF 3 datasets
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 78 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 100 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 95 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 344 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 229 bp overlap
FOXA1 2 datasets
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 194 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 100 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 492 bp overlap
ChIP DE DE-FOXA2-2 397 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 519 bp overlap
ChIP DE DE-GATA4-2 526 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 526 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 444 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 375 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 452 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 348 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 418 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 370 bp overlap
MAX 1 dataset
ChIP A549 ENCFF310XGQ 100 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 200 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 230 bp overlap
PGR 1 dataset
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 109 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 140 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 82 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 207 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 526 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 400 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 486 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 330 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 58 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 50 bp overlap