chr15 : 99,005,431 – 99,005,899
468 bp 112 TFs 2 linked genes
This 468 bp open chromatin element is linked to PGPEP1L and LUNAR1 and is bound by 112 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PGPEP1L at TSS At TSS Proximity
LUNAR1 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:99,000,431 – 99,010,899
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
Ahr::Arnt 2 datasets
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 254 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 241 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 396 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 405 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 289 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 181 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 309 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 141 bp overlap
CTCF 3 datasets
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 236 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 177 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 239 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 99 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 397 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 141 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 175 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 285 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 290 bp overlap
ESR1 4 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 293 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 296 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 118 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 417 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap
FOXA1 4 datasets
ChIP LNCaP_GSK-4H GSE114266.FOXA1.LNCaP_GSK-4H 192 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 374 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 304 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 79 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 128 bp overlap
Foxn1 1 dataset
Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 156 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 293 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 268 bp overlap
HNF1B 1 dataset
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 178 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE97411.INO80.Hep-G2 279 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 272 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 133 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 122 bp overlap
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 278 bp overlap
KLF4 1 dataset
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 209 bp overlap
MAX 6 datasets
ChIP H1 ENCFF914VQY 222 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 346 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 221 bp overlap
ChIP HepG2 ENCFF507HCX 437 bp overlap
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 128 bp overlap
ChIP WTC11 ENCFF223QFY 418 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 317 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 284 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 468 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 256 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 175 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 130 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 313 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 292 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 239 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 383 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 341 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 422 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 355 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 308 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PGR 2 datasets
ChIP T-47D GSE31129.PGR.T-47D 232 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 164 bp overlap
POLR2A 2 datasets
ChIP gastrocnemius medialis ENCFF081DTE 345 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 241 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 130 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 289 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 177 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 193 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 246 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 306 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 290 bp overlap
RUNX1 1 dataset
ChIP ME-1 GSE46044.RUNX1.ME-1 239 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 219 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 231 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 409 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 169 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 468 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 201 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 264 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 229 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 123 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 146 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 97 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 73 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 320 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 272 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 252 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 462 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 348 bp overlap
ZBED4 1 dataset
Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 144 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF213 3 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF324 1 dataset
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZNF343 1 dataset
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF449 3 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF454 3 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF610 1 dataset
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 343 bp overlap
ZNF692 1 dataset
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF768 1 dataset
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 330 bp overlap
ChIP HepG2 ENCFF840FYM 195 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap