chr16 : 14,981,300 – 14,981,748
448 bp 26 TFs 2 linked genes
This 448 bp open chromatin element is linked to PDXDC1 and ENSG00000261819 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PDXDC1 6.2 kb Proximal Proximity
ENSG00000261819 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:14,976,300 – 14,986,748
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 318 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 98 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 218 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 395 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 223 bp overlap
ARID2 1 dataset
ChIP MCF-7_parental GSE123284.ARID2.MCF-7_parental 294 bp overlap
ESR1 6 datasets
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 219 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 224 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 242 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 221 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 263 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 89 bp overlap
FOXA1 12 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 309 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 301 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 302 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 306 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 263 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 250 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 296 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 301 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 292 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 220 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 293 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 301 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 448 bp overlap
ChIP DE DE-FOXA2-2 448 bp overlap
GATA3 11 datasets
ChIP MCF-7 ENCFF178GBS 152 bp overlap
ChIP MCF-7 ENCFF178GBS 438 bp overlap
ChIP MCF-7 ENCFF352QVM 207 bp overlap
ChIP MCF-7 ENCFF437NQS 198 bp overlap
ChIP MCF-7 ENCFF695MAU 148 bp overlap
ChIP MCF-7 ENCFF695MAU 443 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 318 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 319 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 242 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 309 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 84 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 448 bp overlap
ChIP DE DE-GATA4-2 448 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 303 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap
ChIP foregut GSE117136.GATA6.foregut 293 bp overlap
GRHL2 3 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 163 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 210 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 225 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 170 bp overlap
ChIP K562 ENCFF055GAZ 422 bp overlap
ChIP K562 ENCFF317JJX 417 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 128 bp overlap
NR3C1 3 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 183 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 164 bp overlap
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 101 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 123 bp overlap
ChIP HEK293 ENCFF875BDB 321 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 331 bp overlap
PGR 3 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 108 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 148 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 314 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 320 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 349 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 291 bp overlap
SMARCB1 4 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 297 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 318 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 304 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 225 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 409 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 448 bp overlap
TCF7L2 2 datasets
ChIP MCF-7 ENCFF219LIX 198 bp overlap
ChIP MCF-7 ENCFF219LIX 403 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 262 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 198 bp overlap
ChIP HepG2 ENCFF479ZIQ 448 bp overlap
ChIP HepG2 ENCFF479ZIQ 163 bp overlap
ZNF549 1 dataset
ChIP HEK293 ENCFF528IUI 66 bp overlap