chr16 : 49,853,284 – 49,853,558
274 bp 19 TFs 2 linked genes
This 274 bp open chromatin element is linked to ZNF423 and ENSG00000275155 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF423 2.6 kb Proximal Proximity
ENSG00000275155 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:49,848,284 – 49,858,558
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 152 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 57 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 163 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 105 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 83 bp overlap
EZH2 9 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 171 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 51 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 120 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 274 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 155 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 97 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 99 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 96 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 274 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 139 bp overlap
ChIP DE DE-FOXA2-1 247 bp overlap
ChIP DE DE-FOXA2-2 232 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 204 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 204 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 137 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 274 bp overlap
ChIP DE DE-GATA4-2 274 bp overlap
ChIP foregut GSE117136.GATA4.foregut 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 274 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 219 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 136 bp overlap
ChIP DE DE-GATA6-1 274 bp overlap
ChIP DE DE-GATA6-2 274 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 274 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 274 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 274 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 274 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 274 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 274 bp overlap
ChIP foregut GSE117136.GATA6.foregut 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 274 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 186 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 57 bp overlap
KLF9 1 dataset
ChIP HEK293 ENCFF588INF 268 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 260 bp overlap
ChIP K562 ENCFF320GSD 272 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 195 bp overlap
REST 4 datasets
ChIP HEK293 ENCFF073DOT 174 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 87 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 129 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 86 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 274 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 274 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 214 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 217 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 132 bp overlap