chr16 : 51,084,468 – 51,084,991
523 bp 58 TFs 2 linked genes
This 523 bp open chromatin element is linked to ENSG00000285367 and SALL1 and is bound by 58 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000285367 67.4 kb Distal Multiome
SALL1 67.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:51,079,468 – 51,089,991
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 121 bp overlap
BRD4 1 dataset
ChIP HCC1395 GSE63581.BRD4.HCC1395 132 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 146 bp overlap
CTCF 31 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 217 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 138 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 163 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 226 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 259 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 94 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 110 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 115 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 126 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 173 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 206 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 327 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 288 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 111 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 356 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 298 bp overlap
ChIP endodermal cell ENCFF471YCZ 396 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 316 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 296 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 166 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 145 bp overlap
ChIP liver ENCFF895ERR 251 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 144 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 207 bp overlap
ChIP right lobe of liver ENCFF011NDG 394 bp overlap
ChIP right lobe of liver ENCFF250KSY 357 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 369 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 349 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 247 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 263 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 505 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 329 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 270 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 416 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 307 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 393 bp overlap
ChIP DE DE-FOXA2-2 426 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 309 bp overlap
ChIP DE DE-GATA4-2 391 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 303 bp overlap
ChIP DE DE-GATA6-2 410 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 523 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 458 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 381 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 416 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 461 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 355 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 247 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 351 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 403 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 186 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 298 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 448 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 342 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 383 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 496 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 412 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 523 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 369 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 318 bp overlap
ChIP hESC GSE18292.NANOG.hESC 318 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 227 bp overlap
NR4A1 1 dataset
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
Nr2f6 1 dataset
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 358 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 441 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 280 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 259 bp overlap
PPARA::RXRA 1 dataset
Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 486 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 444 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 238 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 213 bp overlap
RAD21 4 datasets
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP liver ENCFF485PAC 395 bp overlap
ChIP liver ENCFF522JHE 149 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 132 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 289 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 286 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 381 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 348 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 335 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 315 bp overlap
SMARCA2 2 datasets
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 273 bp overlap
ChIP NPC_R1159Q_ab GSE122631.SMARCA2.NPC_R1159Q_ab 166 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 365 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 107 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 211 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 207 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 359 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 523 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 274 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 124 bp overlap
STAT3 2 datasets
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
ChIP OCI-Ly10 GSE106844.STAT3.OCI-Ly10 179 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 324 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 258 bp overlap
ZNF234 1 dataset
ChIP HepG2 ENCFF434CIY 249 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 434 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 450 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 214 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 104 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 444 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 245 bp overlap
ZSCAN21 1 dataset
Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap
Huangfu Lab · Publications · Resources · Contact