chr1 : 26,165,542 – 26,165,944
402 bp 77 TFs 2 linked genes
This 402 bp open chromatin element is linked to ZNF593 and FAM110D and is bound by 77 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF593 4.0 kb Proximal Proximity
FAM110D 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:26,160,542 – 26,170,944
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 120 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 124 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 402 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 171 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 73 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 101 bp overlap
BRD4 5 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 146 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 337 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 95 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 210 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 402 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 389 bp overlap
CTCF 1 dataset
ChIP RH4 GSE83726.CTCF.RH4 188 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 177 bp overlap
ChIP K562 ENCFF574LOW 162 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 358 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 193 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 176 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 402 bp overlap
ChIP DE DE-FOXA2-2 398 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF348SOM 357 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 268 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 171 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 180 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 303 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 145 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 402 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 351 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 388 bp overlap
ChIP foregut GSE117136.GATA4.foregut 402 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 392 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 402 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 402 bp overlap
ChIP DE DE-GATA6-2 386 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 387 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 360 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 394 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 402 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 402 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
ChIP foregut GSE117136.GATA6.foregut 402 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 402 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 249 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 208 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 193 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 320 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 231 bp overlap
ChIP K562 ENCFF968WBH 391 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 266 bp overlap
ChIP K562 ENCFF744ALD 343 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 297 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 343 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 321 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 383 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 236 bp overlap
ChIP K562 ENCFF348IBL 361 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 235 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 167 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF128TYE 348 bp overlap
ChIP K562 ENCFF133OLU 346 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 276 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 206 bp overlap
MAFF 1 dataset
ChIP K-562 ENCSR000EGI.MAFF.K-562 189 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 55 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 270 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 299 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 216 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 196 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 107 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 147 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 198 bp overlap
MYOG 2 datasets
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 227 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 210 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 236 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 208 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 200 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 60 bp overlap
ChIP L1236 GSE63736.NFKB1.L1236 214 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 120 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 305 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 153 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 402 bp overlap
ChIP HEK293 ENCFF016MNJ 256 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 357 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 277 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 157 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 256 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 214 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 198 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RUNX1 6 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 382 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 332 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 332 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 382 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 215 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 137 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 402 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 371 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 252 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 179 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 230 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 223 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 113 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 233 bp overlap
ChIP K562 ENCFF059YCJ 354 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 212 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 228 bp overlap
SRF 1 dataset
ChIP GM12878 ENCSR000BMI.SRF.GM12878 99 bp overlap
SUZ12 1 dataset
ChIP NT2/D1 ENCFF574SXS 101 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 191 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 187 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 176 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 177 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 323 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 283 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 187 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 156 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 219 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 142 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 402 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 321 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 340 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 402 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 389 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 192 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 265 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 320 bp overlap