chr16 : 54,292,246 – 54,292,560
314 bp 32 TFs 2 linked genes
This 314 bp open chromatin element is linked to IRX3 and ENSG00000283689 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
IRX3 5.5 kb Proximal Proximity
ENSG00000283689 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:54,287,246 – 54,297,560
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 144 bp overlap
BRD4 1 dataset
ChIP Jurkat GSE83777.BRD4.Jurkat 165 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 54 bp overlap
CTCF 3 datasets
ChIP DND-41 ENCFF913MRA 199 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 139 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 257 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 222 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 121 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 93 bp overlap
ETV1 2 datasets
ChIP COLO-800 GSE80443.ETV1.COLO-800 96 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 148 bp overlap
EZH2 2 datasets
ChIP GM23338 ENCFF613YON 205 bp overlap
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 235 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 246 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 148 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 71 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 166 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 232 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 85 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 180 bp overlap
ChIP HepG2 ENCFF570ABM 134 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 137 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 202 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 231 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 135 bp overlap
GFI1B 1 dataset
ChIP SET-2 GSE121424.GFI1B.SET-2 59 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 62 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 178 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 134 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 83 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 74 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 92 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 183 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 92 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 178 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 103 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 92 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 72 bp overlap
RAD21 1 dataset
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 96 bp overlap
RUNX1 4 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 66 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 66 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 86 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 120 bp overlap
SMARCA4 3 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 88 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 121 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 178 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 308 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 130 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 118 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 106 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 87 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 96 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 129 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 113 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 195 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 59 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 200 bp overlap