chr16 : 74,495,325 – 74,495,916
591 bp 90 TFs 6 linked genes
This 591 bp open chromatin element is linked to 6 target genes and is bound by 90 transcription factors.
Linked Genes
6 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GLG1 111.5 kb Distal Multiome
NPIPB15 117.7 kb Distal Multiome
RFWD3 171.3 kb Distal Multiome
ENSG00000259972 189.3 kb Distal Multiome
PSMD7 198.8 kb Distal Multiome
PSMD7-DT 198.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:74,490,325 – 74,500,916
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 456 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 258 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 591 bp overlap
BHLHE22 2 datasets
ChIP CAL-1 GSE43876.BHLHE22.CAL-1 179 bp overlap
ChIP CAL-1 GSE43876.BHLHE22.CAL-1 133 bp overlap
BRD4 8 datasets
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 197 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 458 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 421 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 440 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 522 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 573 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 377 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 115 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 105 bp overlap
CDK9 6 datasets
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 251 bp overlap
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 195 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 502 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 315 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 339 bp overlap
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 202 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 391 bp overlap
Dmrt1 1 dataset
Motif DE_72h DE_72h-Dmrt1_MA1603.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 473 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF242HCG 332 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 216 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 429 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 166 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 470 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 361 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 591 bp overlap
ChIP DE DE-FOXA2-2 591 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 297 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 591 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 311 bp overlap
ChIP foregut GSE117136.GATA4.foregut 428 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 591 bp overlap
ChIP DE DE-GATA6-2 591 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 537 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 532 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 560 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 591 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 528 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 536 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 520 bp overlap
ChIP foregut GSE117136.GATA6.foregut 445 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 317 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 441 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 277 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF616FJX 494 bp overlap
ChIP GM12878 ENCFF753XDO 530 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF918AID 511 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 556 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 321 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 249 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 381 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 342 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 112 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 115 bp overlap
ChIP U266 GSE142493.IRF4.U266 141 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 381 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 454 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 294 bp overlap
MED1 6 datasets
ChIP GM12878 GSE93080.MED1.GM12878 191 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 526 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 198 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 187 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 517 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 329 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 392 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 227 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 473 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 473 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 559 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 379 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 446 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 351 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 522 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 349 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 428 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 222 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 177 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 518 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 259 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 139 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 352 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 210 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 497 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 517 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 469 bp overlap
Prdm5 1 dataset
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
RBM22 1 dataset
ChIP K-562 ENCSR848AOP.RBM22.K-562 170 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 542 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 231 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 491 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 438 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 530 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 355 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 254 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 541 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 559 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 414 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 526 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 173 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 219 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 156 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 62 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 350 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 193 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 399 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 529 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 234 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 122 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 257 bp overlap
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
TCF4 4 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 287 bp overlap
ChIP CAL-1 GSE76147.TCF4.CAL-1 181 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 209 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 213 bp overlap
TCF7L2 1 dataset
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ZBTB33 1 dataset
ChIP GM12878 ENCFF818EFA 271 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 121 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF214 1 dataset
Motif DE_72h DE_72h-ZNF214_MA1975.2 13 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 411 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 364 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 173 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 521 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 340 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 150 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 139 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF596 1 dataset
ChIP HEK293 ENCFF854MGB 321 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 525 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 498 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 340 bp overlap