chr17 : 16,835,071 – 16,835,593
522 bp 72 TFs 6 linked genes
This 522 bp open chromatin element is linked to 6 target genes and is bound by 72 transcription factors.
Linked Genes
6 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000290978 2.2 kb Proximal Proximity
KRT16P2 2.3 kb Proximal Proximity
MPRIP 207.0 kb Distal Multiome
ZNF287 266.2 kb Distal Multiome
TOP3A 1479.5 kb Distal Multiome+HiCAR
SMCR8 1479.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:16,830,071 – 16,840,593
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ATF2 4 datasets
Motif DE_24h DE_24h-ATF2_MA1632.2 10 bp overlap
Motif DE_36h DE_36h-ATF2_MA1632.2 10 bp overlap
Motif DE_48h DE_48h-ATF2_MA1632.2 10 bp overlap
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
Arid3a 1 dataset
Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap
CTCF 1 dataset
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Crx 1 dataset
Motif DE_24h DE_24h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_24h DE_24h-Dmbx1_MA0883.2 10 bp overlap
E2F8 1 dataset
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
FOS::JUN 4 datasets
Motif DE_24h DE_24h-FOSJUN_MA1126.2 10 bp overlap
Motif DE_36h DE_36h-FOSJUN_MA1126.2 10 bp overlap
Motif DE_48h DE_48h-FOSJUN_MA1126.2 10 bp overlap
Motif DE_60h DE_60h-FOSJUN_MA1126.2 10 bp overlap
FOXA1 1 dataset
Motif DE_24h DE_24h-FOXA1_MA0148.5 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 362 bp overlap
ChIP DE DE-FOXA2-2 429 bp overlap
FOXB1 1 dataset
Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_24h DE_24h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_24h DE_24h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_24h DE_24h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif DE_24h DE_24h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_24h DE_24h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_24h DE_24h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_24h DE_24h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif DE_24h DE_24h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_24h DE_24h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_24h DE_24h-Foxj2_MA0614.1 8 bp overlap
Foxl2 1 dataset
Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_24h DE_24h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_24h DE_24h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_24h DE_24h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 445 bp overlap
ChIP DE DE-GATA4-2 522 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 447 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 522 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 444 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 522 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 522 bp overlap
GSC 1 dataset
Motif DE_24h DE_24h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_24h DE_24h-GSC2_MA0891.2 6 bp overlap
IKZF1 1 dataset
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 2 datasets
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Irf1 4 datasets
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 8 datasets
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 442 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 198 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 441 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 446 bp overlap
JUND 4 datasets
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap
Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
MXI1 3 datasets
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_24h DE_24h-MYB_MA0100.4 6 bp overlap
OTX1 1 dataset
Motif DE_24h DE_24h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif DE_24h DE_24h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_24h DE_24h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_24h DE_24h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 522 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 519 bp overlap
Plagl1 4 datasets
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
Motif DE_48h DE_48h-Plagl1_MA1615.2 8 bp overlap
Motif DE_60h DE_60h-Plagl1_MA1615.2 8 bp overlap
Prdm15 2 datasets
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Motif DE_48h DE_48h-Prdm15_MA1616.2 11 bp overlap
RBPJ 4 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_24h DE_24h-RHOXF1_MA0719.2 6 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 522 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 522 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 522 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 522 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 522 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 419 bp overlap
SPIB 5 datasets
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_24h DE_24h-SPIC_MA0687.2 13 bp overlap
STAT1::STAT2 3 datasets
Motif DE_24h DE_24h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_48h DE_48h-STAT1STAT2_MA0517.2 13 bp overlap
Spi1 1 dataset
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
TFAP2A 1 dataset
Motif DE_24h DE_24h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_24h DE_24h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0524.3 11 bp overlap
ZKSCAN5 5 datasets
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 4 datasets
Motif DE_24h DE_24h-ZNF143_MA0088.2 16 bp overlap
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF211 1 dataset
Motif DE_24h DE_24h-ZNF211_MA1974.2 10 bp overlap
ZNF528 1 dataset
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF766 2 datasets
Motif DE_24h DE_24h-ZNF766_MA2098.1 9 bp overlap
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
ZSCAN4 1 dataset
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap