chr1 : 244,056,664 – 244,056,907
243 bp 37 TFs 2 linked genes
This 243 bp open chromatin element is linked to ZBTB18 and ENSG00000289055 and is bound by 37 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZBTB18 8.1 kb Proximal Proximity
ENSG00000289055 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:244,051,664 – 244,061,907
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 243 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 243 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 243 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 154 bp overlap
CBX8 2 datasets
ChIP K-562 ENCSR000ATW.CBX8.K-562 205 bp overlap
ChIP K562 ENCFF485TBL 168 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 243 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF733NZH 80 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 243 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 174 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 217 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 224 bp overlap
FOXA1 3 datasets
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 94 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 243 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 243 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 221 bp overlap
ChIP DE DE-FOXA2-2 189 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 107 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 171 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 222 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 243 bp overlap
HNRNPK 3 datasets
ChIP HepG2 ENCFF493GNS 122 bp overlap
ChIP HepG2 ENCFF826MXP 114 bp overlap
ChIP K562 ENCFF954RNO 122 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 129 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 242 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 213 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 207 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 91 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 130 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 68 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 243 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 230 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 243 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 149 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 243 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 243 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 141 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 117 bp overlap
ChIP K562 ENCFF022XJR 126 bp overlap
RUNX1 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 60 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 243 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 178 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 209 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 123 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 105 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 243 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 243 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 223 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 178 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 231 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 243 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 154 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 124 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 243 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 166 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 243 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 202 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 177 bp overlap