chr17 : 21,108,710 – 21,109,234
524 bp 13 TFs 7 linked genes
This 524 bp open chromatin element is linked to 7 target genes and is bound by 13 transcription factors.
Linked Genes
7 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DHRS7B 18.1 kb Distal Multiome
USP22 65.9 kb Distal Multiome
TMEM11 105.3 kb Distal Multiome
NATD1 144.5 kb Distal Multiome
MAP2K3 175.8 kb Distal Multiome
CCDC144NL-AS1 240.4 kb Distal Multiome
CCDC144NL 240.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:21,103,710 – 21,114,234
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 81 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 413 bp overlap
ChIP DE DE-FOXA2-2 308 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 441 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 501 bp overlap
ChIP DE DE-GATA6-2 471 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 524 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 524 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 280 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 524 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 490 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 390 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 361 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 500 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 376 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 332 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 330 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 241 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 252 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 267 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 524 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 524 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 524 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 524 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 524 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 524 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 524 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 524 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 301 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 285 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap