chr17 : 40,638,473 – 40,638,606
133 bp 8 TFs 2 linked genes
This 133 bp open chromatin element is linked to SMARCE1 and ENSG00000278834 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SMARCE1 9.2 kb Proximal Proximity
ENSG00000278834 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:40,633,473 – 40,643,606
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 133 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 133 bp overlap
ChIP DE DE-FOXA2-2 133 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 133 bp overlap
ChIP DE DE-GATA4-2 133 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 133 bp overlap
ChIP DE DE-GATA6-2 133 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 133 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 109 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 133 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 133 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 133 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 133 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 73 bp overlap
ChIP HepG2 ENCFF939HTZ 74 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 133 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 133 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 133 bp overlap
U2AF2 2 datasets
ChIP Hep-G2 GSE120104.U2AF2.Hep-G2 133 bp overlap
ChIP Hep-G2 ENCSR991ADX.U2AF2.Hep-G2 124 bp overlap