chr17 : 43,396,093 – 43,396,353
260 bp 43 TFs 3 linked genes
This 260 bp open chromatin element is linked to ARL4D, LINC00910, and ENSG00000288909 and is bound by 43 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARL4D 2.6 kb Proximal Proximity
LINC00910 7.5 kb Proximal Proximity
ENSG00000288909 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:43,391,093 – 43,401,353
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 213 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 260 bp overlap
CDK8 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.CDK8.monocyte_IFNg-LPS 58 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF956TPS 260 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 260 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 184 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 218 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 185 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 260 bp overlap
ChIP DE DE-FOXA2-2 260 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 99 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 126 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 166 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 248 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 260 bp overlap
ChIP K562 ENCFF830LLA 260 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 162 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 260 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 260 bp overlap
ChIP DE DE-GATA6-2 260 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 260 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 260 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 260 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 260 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 260 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 260 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 232 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 260 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 188 bp overlap
ChIP HepG2 ENCFF493GNS 260 bp overlap
ChIP HepG2 ENCFF493GNS 226 bp overlap
IRF1 2 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 260 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 198 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 260 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 205 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 250 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 260 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 260 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 199 bp overlap
MAFF 2 datasets
ChIP K-562 ENCSR000EGI.MAFF.K-562 62 bp overlap
ChIP K562 ENCFF071YKK 86 bp overlap
MAFG 3 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 213 bp overlap
ChIP K562 ENCFF455EEO 57 bp overlap
ChIP K562 ENCFF455EEO 260 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 136 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 260 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 219 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 234 bp overlap
ChIP K562 ENCFF047YKA 146 bp overlap
NFE2L1 1 dataset
ChIP K562 ENCFF138UHK 100 bp overlap
NFE2L2 4 datasets
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 118 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 69 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 77 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 82 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 260 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 190 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 212 bp overlap
RAD21 2 datasets
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 180 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 196 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 260 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 260 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 260 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 260 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 260 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 260 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 260 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 260 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 260 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 212 bp overlap
SPI1 9 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 202 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 199 bp overlap
ChIP GM12891 ENCFF563IUT 224 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 149 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 162 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 204 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 165 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 178 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 213 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 144 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 145 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 260 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 96 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 260 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 260 bp overlap
ZMYM3 1 dataset
ChIP K562 ENCFF361LXT 53 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 84 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 260 bp overlap