chr17 : 45,064,760 – 45,065,008
248 bp 49 TFs 2 linked genes
This 248 bp open chromatin element is linked to NMT1 and DCAKD and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NMT1 3.5 kb Proximal Proximity
DCAKD 3.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:45,059,760 – 45,070,008
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 160 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 239 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 162 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 179 bp overlap
ESR1 66 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 248 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 248 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 248 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 214 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 248 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 239 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 163 bp overlap
ChIP MCF-7-Luc_E2 GSE78284.ESR1.MCF-7-Luc_E2 203 bp overlap
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 237 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 136 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 248 bp overlap
ChIP MCF-7_E2 GSE81510.ESR1.MCF-7_E2 233 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 181 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 248 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 236 bp overlap
ChIP MCF-7_E2 GSE115607.ESR1.MCF-7_E2 248 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 179 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 188 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 198 bp overlap
ChIP MCF-7_E2 ERP000380.ESR1.MCF-7_E2 134 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 145 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 169 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 187 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 200 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 188 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 248 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 248 bp overlap
ChIP MCF-7_E2_45min GSE109820.ESR1.MCF-7_E2_45min 161 bp overlap
ChIP MCF-7_E2_Dex GSE81510.ESR1.MCF-7_E2_Dex 201 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 178 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 149 bp overlap
ChIP MCF-7_ESR1_wildtype GSE100074.ESR1.MCF-7_ESR1_wildtype 209 bp overlap
ChIP MCF-7_Fulv GSE115607.ESR1.MCF-7_Fulv 248 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 239 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 166 bp overlap
ChIP MCF-7_H3B-5942 GSE115607.ESR1.MCF-7_H3B-5942 178 bp overlap
ChIP MCF-7_H3B-6545 GSE115607.ESR1.MCF-7_H3B-6545 218 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 199 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 199 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 228 bp overlap
ChIP MCF-7_RAD1901 GSE115607.ESR1.MCF-7_RAD1901 248 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 195 bp overlap
ChIP MCF-7_SHCTR_E2 GSE60270.ESR1.MCF-7_SHCTR_E2 175 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 138 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 185 bp overlap
ChIP MCF-7_Sat-H3B-6545 GSE115607.ESR1.MCF-7_Sat-H3B-6545 229 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 198 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 177 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 213 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 248 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 196 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 155 bp overlap
ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 200 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 248 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 210 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 242 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 248 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 248 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 248 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 212 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 175 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 223 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 238 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 184 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 184 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 199 bp overlap
ESR1_D538G 1 dataset
ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 198 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 248 bp overlap
ESR1_Y537N 4 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537N.MCF-7_E2 156 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 152 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 187 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 140 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 247 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 211 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 248 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 160 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 216 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 248 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 236 bp overlap
ChIP K562 ENCFF968PEP 236 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 216 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 248 bp overlap
GATA2 7 datasets
ChIP ESF GSE108408.GATA2.ESF 227 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 219 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 158 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 168 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 213 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 211 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 174 bp overlap
GATA3 10 datasets
ChIP MCF-7 ENCFF437NQS 248 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 218 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 235 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 212 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 182 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 120 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 224 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 210 bp overlap
ChIP SK-N-SH ENCFF040SSB 248 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 147 bp overlap
GATA3_Cter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Cter.T-47D_CR3flp 200 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 248 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 207 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 248 bp overlap
ChIP DE DE-GATA4-2 248 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 93 bp overlap
ChIP foregut GSE117136.GATA4.foregut 248 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 219 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 222 bp overlap
ChIP DE DE-GATA6-2 248 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 177 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 136 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 186 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 204 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 237 bp overlap
ChIP K562 ENCFF348IBL 237 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 202 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 173 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 248 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 248 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 182 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 173 bp overlap
NR3C1 1 dataset
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 199 bp overlap
NR3C1_mut 2 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1_mut.MCF-7_E2_Dex 174 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1_mut.MCF-7_ICI_Dex 198 bp overlap
NR5A2 2 datasets
ChIP A549 ENCFF834RVE 248 bp overlap
ChIP A549 ENCFF834RVE 112 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 193 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 181 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 220 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 179 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 187 bp overlap
PAXIP1 2 datasets
ChIP HepG2 ENCFF526NOJ 62 bp overlap
ChIP HepG2 ENCFF526NOJ 248 bp overlap
POLR2A 4 datasets
ChIP GM18505 ENCFF311CYB 61 bp overlap
ChIP GM18505 ENCFF311CYB 248 bp overlap
ChIP HeLa-S3 ENCFF773DNG 248 bp overlap
ChIP adrenal gland ENCFF843OBJ 248 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 248 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 248 bp overlap
ChIP HepG2 ENCFF939HTZ 248 bp overlap
ChIP HepG2 ENCFF939HTZ 248 bp overlap
RELA 1 dataset
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 180 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 139 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 139 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 74 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 192 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 182 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 134 bp overlap
WT1 3 datasets
ChIP HEK293 ENCFF906HIR 161 bp overlap
ChIP HEK293 ENCFF906HIR 107 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 237 bp overlap
YY1AP1 1 dataset
ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 209 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 248 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 173 bp overlap
ZC3H4 1 dataset
ChIP HepG2 ENCFF603QUY 62 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 248 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCFF468FCG 161 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 248 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 201 bp overlap
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