chr1 : 247,096,630 – 247,096,915
285 bp 29 TFs 2 linked genes
This 285 bp open chromatin element is linked to ZNF669 and ENSG00000286747 and is bound by 29 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF669 7.5 kb Proximal Proximity
ENSG00000286747 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:247,091,630 – 247,101,915
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 143 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 285 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 128 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 285 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 200 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 153 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 117 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 213 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 280 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 196 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 285 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 191 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 285 bp overlap
ChIP DE DE-GATA4-2 285 bp overlap
ChIP foregut GSE117136.GATA4.foregut 258 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 285 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 185 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 166 bp overlap
ChIP DE DE-GATA6-1 285 bp overlap
ChIP DE DE-GATA6-2 285 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 285 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 285 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 195 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
ChIP foregut GSE117136.GATA6.foregut 263 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 263 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 195 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 256 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 96 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 88 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 201 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 237 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 169 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 271 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 156 bp overlap
POLR2A 6 datasets
ChIP GM12892 ENCFF245LYF 144 bp overlap
ChIP GM23338 ENCFF450WCS 181 bp overlap
ChIP H1 ENCFF833NJP 85 bp overlap
ChIP HL-60 ENCFF321XKE 163 bp overlap
ChIP K562 ENCFF215CWW 241 bp overlap
ChIP SK-N-SH ENCFF683PFH 189 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 157 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 183 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 153 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 110 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 285 bp overlap
ChIP H1 ENCFF881NFR 285 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 193 bp overlap
ZNF711 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZNF711.HEK293T_22Rv1 128 bp overlap