chr1 : 247,105,540 – 247,105,779
239 bp 9 TFs 3 linked genes
This 239 bp open chromatin element is linked to ENSG00000286747, ZNF669, and LINC02897 and is bound by 9 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286747 135 bp At TSS Proximity
ZNF669 1.2 kb Proximal Proximity
LINC02897 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:247,100,540 – 247,110,779
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
ESR1 1 dataset
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 75 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 119 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 68 bp overlap
RFX1 2 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 50 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 54 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 63 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap