chr17 : 63,775,530 – 63,775,783
253 bp 114 TFs 2 linked genes
This 253 bp open chromatin element is linked to DDX42 and CCDC47 and is bound by 114 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DDX42 1.7 kb Proximal Proximity
CCDC47 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:63,770,530 – 63,780,783
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K-562 ENCSR426URK.AFF1.K-562 253 bp overlap
ChIP K562 ENCFF583EEH 253 bp overlap
AR 8 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 252 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 147 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 218 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 109 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 253 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 145 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 253 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 233 bp overlap
ChIP K562 ENCFF938UXQ 253 bp overlap
ARID2 5 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 204 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 206 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 253 bp overlap
ChIP K-562 ENCSR491EBY.ARID2.K-562 249 bp overlap
ChIP K562 ENCFF099BVK 253 bp overlap
ARNT 3 datasets
ChIP K-562 ENCSR155KHM.ARNT.K-562 253 bp overlap
ChIP K-562 ENCSR613NUC.ARNT.K-562 248 bp overlap
ChIP K562 ENCFF291CXK 253 bp overlap
ASH1L 2 datasets
ChIP K-562 ENCSR115BBC.ASH1L.K-562 253 bp overlap
ChIP K562 ENCFF808EMX 253 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 253 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 153 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 253 bp overlap
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 231 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 220 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 212 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 253 bp overlap
CHD1 4 datasets
ChIP K-562 ENCSR000AQD.CHD1.K-562 177 bp overlap
ChIP K562 ENCFF118VJV 253 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 249 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 183 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 178 bp overlap
CTCF 1 dataset
ChIP MCF-7 ENCFF139NQI 253 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 253 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 253 bp overlap
ChIP K562 ENCFF775HUO 161 bp overlap
ChIP MCF-7 ENCFF712EXQ 253 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 253 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 222 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 253 bp overlap
ChIP K562 ENCFF850OZQ 253 bp overlap
ESR1 2 datasets
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 241 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 253 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 221 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF255RHV 253 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 68 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 253 bp overlap
GATA1 6 datasets
ChIP K-562 GSE107726.GATA1.K-562 204 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 131 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 178 bp overlap
ChIP erythroblast ENCFF867JAR 253 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 253 bp overlap
GATA2 12 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 153 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 170 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 162 bp overlap
ChIP K562 ENCFF513FTZ 229 bp overlap
ChIP K562 ENCFF830LLA 253 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 140 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 140 bp overlap
ChIP SH-SY5Y ENCFF485YIB 253 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 253 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 227 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 139 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 171 bp overlap
GATA3 5 datasets
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 94 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 253 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 250 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 193 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 253 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 253 bp overlap
ChIP DE DE-GATA4-2 253 bp overlap
ChIP foregut GSE117136.GATA4.foregut 253 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 253 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 216 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 253 bp overlap
ChIP DE DE-GATA6-2 253 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 253 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 253 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 152 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 253 bp overlap
ChIP foregut GSE117136.GATA6.foregut 253 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 253 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 253 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 253 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 253 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 229 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 253 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 230 bp overlap
ChIP K562 ENCFF928TKZ 253 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 208 bp overlap
ChIP K562 ENCFF744ALD 253 bp overlap
HDGF 4 datasets
ChIP GM12878 ENCFF653WYI 199 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 253 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 253 bp overlap
ChIP K562 ENCFF682FBH 253 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 253 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 253 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 93 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 253 bp overlap
ChIP K562 ENCFF348IBL 179 bp overlap
ChIP K562 ENCFF771OHZ 221 bp overlap
JUND 1 dataset
ChIP HCT116 ENCFF748ZQX 126 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 153 bp overlap
ChIP K562 ENCFF128TYE 253 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 119 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 253 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 253 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 253 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 79 bp overlap
MAX 1 dataset
ChIP K562 ENCFF110LJS 253 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 230 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 69 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 245 bp overlap
MLLT1 4 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 253 bp overlap
ChIP K562 ENCFF074XRJ 253 bp overlap
ChIP K562 ENCFF871DSA 253 bp overlap
ChIP MCF-7 ENCFF198JJP 253 bp overlap
MNT 3 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 253 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 242 bp overlap
ChIP K562 ENCFF820IGH 253 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 200 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 253 bp overlap
ChIP K562 ENCFF441KCP 253 bp overlap
MXI1 1 dataset
ChIP K562 ENCFF336XYS 145 bp overlap
MYC 1 dataset
ChIP K562 ENCFF640IEK 157 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 253 bp overlap
ChIP K562 ENCFF146YTY 253 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR298JCG.NCOR1.K-562 228 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCFF799WGQ 253 bp overlap
NFXL1 1 dataset
ChIP MCF-7 ENCFF505SHB 53 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF239KMA 231 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 253 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 253 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 253 bp overlap
PGR 12 datasets
ChIP AB32 GSE31129.PGR.AB32 236 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 253 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 253 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 240 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 195 bp overlap
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 232 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 253 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 253 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 253 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 253 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 253 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 240 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 190 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF137JSF 253 bp overlap
ChIP K562 ENCFF514URW 253 bp overlap
ChIP erythroblast ENCFF498VMR 253 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 253 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 233 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 253 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 61 bp overlap
ChIP K562 ENCFF740YLK 176 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 208 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 163 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 69 bp overlap
ChIP HepG2 ENCFF939HTZ 69 bp overlap
ChIP K562 ENCFF196WTG 112 bp overlap
ChIP K562 ENCFF967GRF 112 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 236 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 178 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 209 bp overlap
SIN3A 4 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 188 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 162 bp overlap
ChIP SK-N-SH ENCFF931NFD 229 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 210 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 237 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 253 bp overlap
ChIP K562 ENCFF506JCB 180 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 155 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 141 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 85 bp overlap
SMARCE1 3 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 253 bp overlap
ChIP K562 ENCFF690CFF 253 bp overlap
ChIP K562 ENCFF690CFF 253 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 253 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 247 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 184 bp overlap
TAF1 3 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 200 bp overlap
ChIP MCF-7 ENCFF091WNP 123 bp overlap
ChIP MCF-7 ENCFF091WNP 253 bp overlap
TAF9B 1 dataset
ChIP K562 ENCFF121ZIF 253 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 209 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 58 bp overlap
TOE1 2 datasets
ChIP K562 ENCFF728FRA 76 bp overlap
ChIP K562 ENCFF728FRA 253 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 124 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 223 bp overlap
XRCC5 1 dataset
ChIP HepG2 ENCFF680LVJ 253 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 253 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 121 bp overlap
ZKSCAN1 2 datasets
ChIP MCF-7 ENCFF247MBY 239 bp overlap
ChIP MCF-7 ENCSR449UFF.ZKSCAN1.MCF-7 221 bp overlap
ZNF140 2 datasets
ChIP HEK293 GSE76494.ZNF140.HEK293 163 bp overlap
ChIP HEK293 ENCSR464KFG.ZNF140.HEK293 143 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 253 bp overlap
ChIP K562 ENCFF352SDL 253 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 253 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 253 bp overlap
ZNF184 2 datasets
ChIP K-562 ENCSR546IHU.ZNF184.K-562 116 bp overlap
ChIP K562 ENCFF579ZRD 224 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 239 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 234 bp overlap
ChIP K562 ENCFF877JCX 253 bp overlap
ZNF260 1 dataset
ChIP HEK293 GSE76494.ZNF260.HEK293 157 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 253 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 165 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 232 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 190 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 253 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 137 bp overlap
ZNF444 2 datasets
ChIP MCF-7 ENCFF602QFR 253 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 231 bp overlap
ZNF512B 1 dataset
ChIP MCF-7 ENCFF233IPF 253 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 173 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 253 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 158 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF840FYM 253 bp overlap