chr17 : 73,973,921 – 73,975,163
1,242 bp 108 TFs 2 linked genes
This 1.2 kb open chromatin element is linked to LINC02074 and RPL38 and is bound by 108 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC02074 138.2 kb Distal Multiome
RPL38 229.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:73,968,921 – 73,980,163
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ASCL1 5 datasets
ChIP G523NS_Dox GSE87618.ASCL1.G523NS_Dox 260 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 247 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 295 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 280 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 146 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 254 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 371 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 168 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 327 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 232 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 361 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 125 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 274 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 240 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 688 bp overlap
CTCF 1 dataset
Motif DE_72h DE_72h-CTCF_MA1929.2 31 bp overlap
DMRTA1 1 dataset
Motif DE_72h DE_72h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_72h DE_72h-DMRTC2_MA1479.2 11 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 246 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 138 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 371 bp overlap
ESR1 4 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 220 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 74 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 304 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 533 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 268 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 582 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 141 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 598 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 553 bp overlap
ChIP DE DE-FOXA2-2 564 bp overlap
FOXJ3 2 datasets
ChIP SK-N-SH ENCFF124KVL 383 bp overlap
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 300 bp overlap
GATA2 5 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 333 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 369 bp overlap
GATA3 3 datasets
ChIP BE2C GSE65664.GATA3.BE2C 257 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 359 bp overlap
ChIP NGP GSE65664.GATA3.NGP 233 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 1118 bp overlap
ChIP DE DE-GATA4-2 1112 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 832 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 512 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 409 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 328 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 232 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 1123 bp overlap
ChIP DE DE-GATA6-2 1139 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 517 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1086 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1033 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1063 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 945 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1072 bp overlap
ChIP foregut GSE117136.GATA6.foregut 800 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 341 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 366 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 368 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 357 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 390 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 720 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 732 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 780 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 431 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 310 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 355 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 782 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 427 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 253 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 446 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 286 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 215 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 209 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 263 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 418 bp overlap
MYCN 7 datasets
ChIP BE2C GSE80151.MYCN.BE2C 339 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 721 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 231 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 218 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 652 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 339 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 229 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 478 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
NFKB1 2 datasets
Motif DE_72h DE_72h-NFKB1_MA0105.4 13 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 199 bp overlap
NFKB2 1 dataset
Motif DE_72h DE_72h-NFKB2_MA0778.2 11 bp overlap
NR2F6 1 dataset
Motif DE_72h DE_72h-NR2F6_MA1539.1 15 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 490 bp overlap
Nfe2l2 1 dataset
Motif DE_72h DE_72h-Nfe2l2_MA0150.3 11 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 456 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 389 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 690 bp overlap
POLR2A 2 datasets
ChIP transverse colon ENCFF607LKE 371 bp overlap
ChIP transverse colon ENCFF840PXT 103 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 396 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 399 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 492 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 258 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 389 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 180 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 516 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 86 bp overlap
RXRB 1 dataset
Motif DE_72h DE_72h-RXRB_MA1555.1 14 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 286 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1091 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 966 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 555 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 226 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 209 bp overlap
SMARCC1 2 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 293 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 431 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 576 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1046 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
TAL1 1 dataset
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 263 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 197 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 325 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 363 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 309 bp overlap
TCF3 3 datasets
ChIP 697_HF GSE138031.TCF3.697_HF 274 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 623 bp overlap
ChIP RPMI8402 GSE39179.TCF3.RPMI8402 201 bp overlap
TCF4 3 datasets
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 512 bp overlap
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 336 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 336 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 253 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 102 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 199 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 676 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 676 bp overlap
ZBTB24 1 dataset
Motif DE_72h DE_72h-ZBTB24_MA2330.1 10 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 452 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF669 1 dataset
Motif DE_72h DE_72h-ZNF669_MA1985.1 15 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF692 1 dataset
Motif DE_72h DE_72h-ZNF692_MA1986.2 8 bp overlap
Zfx 1 dataset
Motif DE_72h DE_72h-Zfx_MA0146.3 10 bp overlap