chr17 : 75,044,818 – 75,045,656
838 bp 154 TFs 3 linked genes
This 838 bp open chromatin element is linked to ATP5PD, KCTD2, and RN7SL573P and is bound by 154 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ATP5PD 1.3 kb Proximal Proximity
KCTD2 1.5 kb Proximal Proximity
RN7SL573P 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:75,039,818 – 75,050,656
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
154 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap
BCL11A 1 dataset
Motif DE_24h DE_24h-BCL11A_MA2324.1 7 bp overlap
BCL6 1 dataset
Motif DE_24h DE_24h-BCL6_MA0463.3 13 bp overlap
CDX1 3 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif DE_24h DE_24h-CDX1_MA0878.3 10 bp overlap
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_24h DE_24h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_24h DE_24h-CDX4_MA1473.2 9 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 166 bp overlap
CTCF 1 dataset
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
E2F6 1 dataset
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif DE_24h DE_24h-E2F7_MA0758.1 14 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 156 bp overlap
EOMES 2 datasets
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 183 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ERF::FOXO1 2 datasets
Motif DE_24h DE_24h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_24h DE_24h-ERFFOXO1_MA1936.2 12 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 257 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 148 bp overlap
ETV2 1 dataset
Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap
Elf5 2 datasets
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 125 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 309 bp overlap
ChIP DE DE-GATA4-2 309 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 415 bp overlap
ChIP DE DE-GATA6-2 594 bp overlap
Motif DE_24h DE_24h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 642 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 561 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 838 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 604 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 302 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 370 bp overlap
GRHL2 1 dataset
Motif DE_24h DE_24h-GRHL2_MA1105.3 8 bp overlap
Gata3 1 dataset
Motif DE_24h DE_24h-Gata3_MA0037.5 8 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 140 bp overlap
HOXA10 1 dataset
Motif DE_24h DE_24h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
HOXB4 1 dataset
Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap
HOXD9 1 dataset
Motif DE_24h DE_24h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap
Hoxa13 2 datasets
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
IKZF1 2 datasets
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap
IRF7 2 datasets
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 680 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 827 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 323 bp overlap
JUND 3 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 197 bp overlap
MAZ 1 dataset
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
MEIS1 2 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MSC 1 dataset
Motif DE_24h DE_24h-MSC_MA0665.1 10 bp overlap
MXI1 1 dataset
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
MYF6 1 dataset
Motif DE_24h DE_24h-MYF6_MA0667.1 10 bp overlap
MYOD1 1 dataset
Motif DE_24h DE_24h-MYOD1_MA0499.3 9 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 241 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 292 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 244 bp overlap
ChIP hESC GSE18292.NANOG.hESC 167 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 124 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 205 bp overlap
NFIA 1 dataset
Motif DE_24h DE_24h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_24h DE_24h-NFIX_MA0671.2 6 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
PATZ1 1 dataset
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PBX3 1 dataset
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
PGR 2 datasets
Motif DE_24h DE_24h-PGR_MA2327.1 9 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 200 bp overlap
PHOX2A 1 dataset
Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 1 dataset
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 631 bp overlap
POU1F1 1 dataset
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 762 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 244 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 771 bp overlap
POU6F2 1 dataset
Motif DE_24h DE_24h-POU6F2_MA0793.2 9 bp overlap
PRDM1 1 dataset
Motif DE_24h DE_24h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Pax7 1 dataset
Motif DE_24h DE_24h-Pax7_MA0680.3 10 bp overlap
Pgr 1 dataset
Motif DE_24h DE_24h-Pgr_MA2323.1 17 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
RARA 1 dataset
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
RBPJ 2 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_24h DE_24h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
RFX4 1 dataset
Motif DE_24h DE_24h-RFX4_MA0799.3 13 bp overlap
RFX5 1 dataset
Motif DE_24h DE_24h-RFX5_MA0510.3 14 bp overlap
RORA 1 dataset
Motif DE_24h DE_24h-RORA_MA0072.2 11 bp overlap
Runx1 2 datasets
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 212 bp overlap
SATB1 3 datasets
Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap
Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap
Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 163 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 122 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 278 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 477 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 428 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 838 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 838 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 838 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 838 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 838 bp overlap
SNAI2 1 dataset
Motif DE_24h DE_24h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_24h DE_24h-SNAI3_MA1559.2 9 bp overlap
SOX13 1 dataset
Motif DE_24h DE_24h-SOX13_MA1120.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 228 bp overlap
SOX2 2 datasets
Motif DE_24h DE_24h-SOX2_MA0143.5 7 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX21 2 datasets
Motif DE_24h DE_24h-SOX21_MA0866.1 15 bp overlap
Motif DE_24h DE_24h-SOX21_MA0866.1 15 bp overlap
SP1 3 datasets
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
SP2 1 dataset
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_24h DE_24h-SPIC_MA0687.2 13 bp overlap
SREBF1 1 dataset
Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 143 bp overlap
Six3 3 datasets
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
Motif DE_24h DE_24h-Six3_MA0631.2 11 bp overlap
Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap
Sox1 1 dataset
Motif DE_24h DE_24h-Sox1_MA0870.1 15 bp overlap
Sox17 1 dataset
Motif DE_24h DE_24h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_24h DE_24h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_24h DE_24h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_24h DE_24h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 189 bp overlap
TBP 4 datasets
ChIP hESC GSE122298.TBP.hESC 153 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 251 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 126 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 156 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 138 bp overlap
TFCP2 1 dataset
Motif DE_24h DE_24h-TFCP2_MA1968.2 9 bp overlap
TGIF1 1 dataset
Motif DE_24h DE_24h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_24h DE_24h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_24h DE_24h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_24h DE_24h-TGIF2LY_MA1572.1 12 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 217 bp overlap
TRPS1 1 dataset
Motif DE_24h DE_24h-TRPS1_MA1970.2 8 bp overlap
Tbx6 2 datasets
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Tcf21 1 dataset
Motif DE_24h DE_24h-Tcf21_MA0832.2 10 bp overlap
USF1 2 datasets
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 159 bp overlap
ZEB1 1 dataset
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_24h DE_24h-ZIM3_MA1709.2 11 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF547 1 dataset
Motif DE_24h DE_24h-ZNF547_MA2334.1 13 bp overlap
ZNF667 1 dataset
Motif DE_24h DE_24h-ZNF667_MA1984.2 11 bp overlap
ZNF701 2 datasets
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF75A 1 dataset
Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_24h DE_24h-ZNF75D_MA1601.2 12 bp overlap
ZNF816 1 dataset
ChIP HepG2 ENCFF294VPD 339 bp overlap
Zfp809 1 dataset
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap