chr18 : 5,902,128 – 5,902,348
220 bp 10 TFs 3 linked genes
This 220 bp open chromatin element is linked to ENSG00000264449, ENSG00000266846, and TMEM200C and is bound by 10 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000264449 6.4 kb Proximal Proximity
ENSG00000266846 6.4 kb Proximal Proximity
TMEM200C 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:5,897,128 – 5,907,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 112 bp overlap
ChIP BLaER1 ENCFF335XTP 203 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 95 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 220 bp overlap
ChIP DE DE-GATA4-2 220 bp overlap
ChIP foregut GSE117136.GATA4.foregut 220 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 220 bp overlap
ChIP DE DE-GATA6-2 220 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 220 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 207 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 220 bp overlap
ChIP foregut GSE117136.GATA6.foregut 220 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 220 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 181 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 170 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 218 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 220 bp overlap