chr18 : 9,106,879 – 9,107,161
282 bp 93 TFs 3 linked genes
This 282 bp open chromatin element is linked to ENSG00000265257, NDUFV2, and ENSG00000288939 and is bound by 93 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000265257 4.1 kb Proximal Proximity
NDUFV2 4.2 kb Proximal Proximity
ENSG00000288939 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:9,101,879 – 9,112,161
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 282 bp overlap
BCL6B 2 datasets
ChIP HEK293 ENCFF555YRB 282 bp overlap
ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 244 bp overlap
BRD2 1 dataset
ChIP MM1-S GSE43743.BRD2.MM1-S 109 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 282 bp overlap
BRD4 2 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 135 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 67 bp overlap
CDK8 1 dataset
ChIP MM1-S GSE43743.CDK8.MM1-S 154 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 282 bp overlap
ChIP H1 ENCFF126NLU 87 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 282 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 255 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 282 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 282 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 263 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 273 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 201 bp overlap
ChIP K562 ENCFF574LOW 282 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 167 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 175 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 218 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 282 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 282 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 282 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 209 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 156 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 247 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 282 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 282 bp overlap
ChIP DE DE-GATA4-2 282 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 282 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 282 bp overlap
ChIP DE DE-GATA6-2 282 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 282 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 282 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 282 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 282 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 192 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 176 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 282 bp overlap
ChIP K562 ENCFF317JJX 282 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 180 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 76 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 134 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 282 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 245 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 282 bp overlap
KLF16 2 datasets
ChIP HEK293 ENCFF558HSJ 282 bp overlap
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 265 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 224 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 224 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE83671.KMT2A.MV4-11 93 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCFF783SBT 76 bp overlap
ChIP HepG2 ENCFF452YUT 102 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 120 bp overlap
ChIP HepG2 ENCFF743ZOF 78 bp overlap
ChIP HepG2 ENCFF767LDG 83 bp overlap
MAX 2 datasets
ChIP MM1-S_JQ1 GSE42161.MAX.MM1-S_JQ1 81 bp overlap
ChIP MM1-S_JQ1 GSE42161.MAX.MM1-S_JQ1 54 bp overlap
MED1 1 dataset
ChIP MM1-S_DMSO GSE36354.MED1.MM1-S_DMSO 197 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 282 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 282 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 282 bp overlap
ChIP K562 ENCFF320GSD 172 bp overlap
MEN1 1 dataset
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 282 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 282 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 266 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 273 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 282 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 282 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 282 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 268 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 254 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 268 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 282 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 267 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 282 bp overlap
PBX2 3 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 282 bp overlap
ChIP K562 ENCFF286KMN 282 bp overlap
ChIP K562 ENCFF286KMN 83 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 147 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 262 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 181 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 282 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 273 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 274 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 233 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 282 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 234 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 258 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 282 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 159 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 282 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 262 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 282 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 213 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 279 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 196 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 161 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 218 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 212 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 218 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 144 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 264 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 136 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 125 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 199 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 252 bp overlap
ChIP K562 ENCFF059YCJ 282 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 282 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 282 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 138 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 180 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 270 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 282 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 282 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 270 bp overlap
ZBTB26 1 dataset
ChIP HEK293 GSE76494.ZBTB26.HEK293 56 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 143 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 277 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 282 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 282 bp overlap
ZNF266 1 dataset
ChIP HEK293 ENCFF483FIW 250 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 166 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 268 bp overlap
ZNF350 1 dataset
ChIP HEK293 ENCFF428BAO 282 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 262 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 263 bp overlap
ZNF623 1 dataset
ChIP HEK293 ENCFF505YHP 282 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 282 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 208 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 282 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 282 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 133 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 282 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 282 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 282 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 282 bp overlap