chr18 : 35,383,338 – 35,384,335
997 bp 17 TFs 2 linked genes
This 997 bp open chromatin element is linked to RPL7AP67 and ZNF396 and is bound by 17 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPL7AP67 at TSS At TSS Proximity
ZNF396 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:35,378,338 – 35,389,335
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 325 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 269 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 542 bp overlap
CTCF 1 dataset
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 121 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 209 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 800 bp overlap
ChIP DE DE-FOXA2-2 819 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 910 bp overlap
ChIP DE DE-GATA4-2 927 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 637 bp overlap
ChIP DE DE-GATA6-2 902 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 560 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 378 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 217 bp overlap
MCM5 1 dataset
ChIP K-562 ENCSR628APV.MCM5.K-562 152 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 334 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 419 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 997 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 577 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 212 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 158 bp overlap