chr18 : 49,252,346 – 49,252,812
466 bp 15 TFs 4 linked genes
This 466 bp open chromatin element is linked to 4 target genes and is bound by 15 transcription factors.
Linked Genes
4 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DYM 208.2 kb Distal Multiome
C18orf32 234.7 kb Distal Multiome
RPL17 240.0 kb Distal Multiome
SMAD7 304.0 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:49,247,346 – 49,257,812
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 334 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
GATA3 1 dataset
ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 70 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 466 bp overlap
ChIP DE DE-GATA4-2 466 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 466 bp overlap
ChIP DE DE-GATA6-2 466 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 338 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 452 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 451 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 263 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 449 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 446 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 336 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 451 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 339 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 421 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 69 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 141 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 328 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 252 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 127 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 147 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 191 bp overlap